State the Similarities and Differences in Transcription Regulation Between Eukaryotes and Bacteria/Archaea

What are the similarities and differences between transcription regulation in eukaryotes and bacteria/archaea?

Similarities:

Transcription Initiation: Transcription initiation is the most regulated step in both bacteria/archaea and eukaryotes. This involves a group of transcription factors working together with RNA polymerase to promote the formation of transcription initiation complexes. The core promoter controls transcription initiation in both types of organisms. Additionally, the mechanisms of silencing transcription are the same in both eukaryotes and bacteria/archaea.

Differences:

Complexity of Transcription Initiation Complexes: In eukaryotes, transcription initiation complexes are more complicated and involve more factors compared to bacteria/archaea. This complexity in eukaryotes is due to the involvement of a broad range of transcription factors, some of which have no bacterial/archaeal equivalents. On the other hand, in bacteria/archaea, only a few transcription factors, such as sigma factors, interact with RNA polymerase. Role of DNA Sequences: In eukaryotes, DNA sequences play a significant role in transcription regulation, while in bacteria/archaea, DNA sequences have a minor role. Regulation of RNA Processing and mRNA Transport: The regulation of RNA processing and mRNA transport is much more complex in eukaryotes compared to bacteria/archaea. Eukaryotes have specialized transport systems, such as nuclear pore complexes (NPC), for mRNA transport, whereas bacteria and archaea do not. Mechanism of Attenuation: Attenuation, a mechanism that controls transcription in bacteria/archaea, is not found in eukaryotes.

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